The detailed information of tRNA gene sequence


Sequence ID>ENV09000039
Genome IDABSN01001942
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 1206
End posion on genome 1282
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgagtttcga
tRNA gene sequence 
GGGGCCGTCGTTCAGCTGGTTAGGACGCCAGATTGTCAATCTGGAGGTCGCGGGTTCAAA
TCCCGTCGGCCCCGCCA
Downstream region at tRNA end position 
attttccacg
Secondary structure (Cloverleaf model)
>ENV09000039	Asp	GTC
                   a      GCCA attttccacg
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C G A        C      + | | | |     A
    T       C T T G       G C G G G     C
    G       | + | |                 T T
    G       G G A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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