The detailed information of tRNA gene sequence


Sequence ID>ENV09000082
Genome IDABSN01006787
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 387
End posion on genome 312
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cgaacgggac
tRNA gene sequence 
GGCGACGTACCCAAGTGGTTAAGGGAAGGCTCTGCAAAAGCCTCATTCGTCGGTTCGACC
CCGACCGTCGCCTCCA
Downstream region at tRNA end position 
ctcccgtgcc
Secondary structure (Cloverleaf model)
>ENV09000082	Cys	GCA
                   c      TCCA ctcccgtgcc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          C C
                    T     C A G C C     A
      T G A        A      | | | | |     G
    G       A C C C       G T C G G     C
    G         | | |                 T T
    T       A G G G
      T A          A     CATTC
                    A - T
                    G - C
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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