The detailed information of tRNA gene sequence


Sequence ID>ENV09000098
Genome IDABSN01009809
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 78
End posion on genome 153
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tcctgcccgt
tRNA gene sequence 
GGGCCGGTAGCTCAGGGGTCAGAGCAGGGGACTTTTAATCCTCGTGTCCTGGGTTCGAAT
CCCAGCCGGCTCACCA
Downstream region at tRNA end position 
gcacttctct
Secondary structure (Cloverleaf model)
>ENV09000098	Lys	TTT
                   t      ACCA gcacttctct
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G A C C C     A
      G G A        A      | | | | |     G
    G       C T C G       C T G G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     GTGTC
                    G - C
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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