The detailed information of tRNA gene sequence


Sequence ID>ENV09000109
Genome IDABSN01012647
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 454
End posion on genome 379
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
atcgcccgac
tRNA gene sequence 
GCCGGCGTAGCTCAGTTGGTAGAGCAGTGGTTTTGTAAACCTCAGGTCGGGGGTTCGACT
CCCTCCGCCGGCACCA
Downstream region at tRNA end position 
tcccgacgag
Secondary structure (Cloverleaf model)
>ENV09000109	Thr	TGT
                   c      ACCA tcccgacgag
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    T   T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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