The detailed information of tRNA gene sequence


Sequence ID>ENV09000117
Genome IDABSN01013657
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 362
End posion on genome 292
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aagactatga
tRNA gene sequence 
GGCCTCATAGTCTAGAGGTAAAACGACTCGTTCACGTCGAGTAGTCCCGGGTTCGATTCC
CAGTGGGGCCAttt
Downstream region at tRNA end position 
tagcaatgaa
Secondary structure (Cloverleaf model)
>ENV09000117	Val	CAC
                   a      Attt tagcaatgaa
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T          T T
                    T     G A C C C     A
        G A        A      |   | | |     G
      A     T C T G       C C G G G     C
      G     |   | |                 T T
      G     A A A C
        T A        G     AGTC
                    A - T
                    C - G
                    T - A
                    C - G
                    G - C
                  T       T
                  T       G
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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