The detailed information of tRNA gene sequence


Sequence ID>ENV09000162
Genome IDABSN01020870
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 519
End posion on genome 429
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctgccgggc
tRNA gene sequence 
GGAGAGGTGCCGGAGTCTGGTCGATCGGACCGCACTGCTAATGCGGGGTCCACGTAAAGT
GGACCGTGGGTTCAAATCCCACCCTCTCCGCgt
Downstream region at tRNA end position 
tgtgatctcg
Secondary structure (Cloverleaf model)
>ENV09000162	Ser	GCT
                   c      GCgt tgtgatctcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     A
  T         G G C C       G T G G G     C
  G         + | | |                 T T
  G         T C G G
    T C G A        A     GGTCCACGTAAAGTGGACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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