The detailed information of tRNA gene sequence


Sequence ID>ENV09000172
Genome IDABSN01022722
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 455
End posion on genome 527
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccatacgcac
tRNA gene sequence 
GGCGGAGTAGCCAAATGGTAAGGCAATGGTTTGCAAAACCGTCATGAGTGGGTTCGATTC
CCACCTCCGCCTCgc
Downstream region at tRNA end position 
tctcaaagcc
Secondary structure (Cloverleaf model)
>ENV09000172	Cys	GCA
                   c      TCgc tctcaaagcc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     C A C C C     A
        A A        A      | | | | |     G
      T     A C C G       G T G G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATGA
                    A - T
                    T + G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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