The detailed information of tRNA gene sequence


Sequence ID>ENV09000178
Genome IDABSN01023591
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 259
End posion on genome 184
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ttttcgtcgt
tRNA gene sequence 
GGAAGTGTAGCTCAGTTGGTAGAGCAGCTGACTCTTAATCAGCGGGTCCAGGGTTCGAGT
CCCTGCACTTCTACCA
Downstream region at tRNA end position 
gtcaaaaccc
Secondary structure (Cloverleaf model)
>ENV09000178	Lys	CTT
                   t      ACCA gtcaaaaccc
                     G + T
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     G T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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