The detailed information of tRNA gene sequence


Sequence ID>ENV09000196
Genome IDABSN01027170
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 474
End posion on genome 386
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gccttaggac
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTTAATGGCAGCAGACTGTAAATCTGCCGCTCCTTGCGAGCTA
CGAAGGTTCGAATCCTTCCCTGTCCACCA
Downstream region at tRNA end position 
ttccctgggt
Secondary structure (Cloverleaf model)
>ENV09000196	Tyr	GTA
                   c      ACCA ttccctgggt
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A A G G     C
    G       + | | |                 T T
    T       T G G C
      T A A        A     CGCTCCTTGCGAGCTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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