The detailed information of tRNA gene sequence


Sequence ID>ENV09000208
Genome IDABSN01030468
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 479
End posion on genome 565
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gcaagactct
tRNA gene sequence 
GCCGGGATGGCGGAATGGTAGACGCGGCGGTCTCAAACACCGTTGAGCTAAACCCTCGTG
TGGGTTCGAGTCCCACTCCCGGCACCA
Downstream region at tRNA end position 
gctccatgga
Secondary structure (Cloverleaf model)
>ENV09000208	Leu	CAA
                   t      ACCA gctccatgga
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    G       G G C G       G T G G G     C
    G         | | |                 T T
    T       A C G C
      A G          G     TGAGCTAAACCCTCGT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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