The detailed information of tRNA gene sequence


Sequence ID>ENV09000229
Genome IDABSN01034802
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 823
End posion on genome 897
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccctcaattt
tRNA gene sequence 
GGCGAGGTAGCTCAGCTGGTTAGAGCGCATGATTCATAATCATGAGGTCGACGGTTCAAG
CCCGTCTCTCGCTACtg
Downstream region at tRNA end position 
aagcgggttt
Secondary structure (Cloverleaf model)
>ENV09000229	Met	CAT
                   t      ACtg aagcgggttt
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          C G
                    T     C T G C C     A
      C G A        A      | | | | |     A
    T       C T C G       G A C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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