The detailed information of tRNA gene sequence


Sequence ID>ENV09000233
Genome IDABSN01035561
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 687
End posion on genome 761
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
attggacgac
tRNA gene sequence 
GGCGGCGTAGCCAAGTGGTAAGGCAACGGTCTGCAAAACCGTCATTCACCGGTTCAAATC
CGGTCGCCGNCTCCA
Downstream region at tRNA end position 
acgtcgnnnn
Secondary structure (Cloverleaf model)
>ENV09000233	Cys	GCA
                   c      TCCA acgtcgnnnn
                     G - C
                     G   N
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G G C C     A
        G A        A      | | | | |     A
      T     A C C G       A C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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