The detailed information of tRNA gene sequence


Sequence ID>ENV09000239
Genome IDABSN01036220
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 713
End posion on genome 637
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aatttgttaT
tRNA gene sequence 
GCCAGCGTAGCTCAGCCTGGGAGAGCACTCGGCTGAAGACCGGGCCGTCGGGCGTTCAAA
TCCCCCCGCTGGCATCt
Downstream region at tRNA end position 
tatacttttt
Secondary structure (Cloverleaf model)
>ENV09000239	Phe	GAA
                   T      ATCt tatacttttt
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C C C C C     A
      C G A        A      | | |   |     A
    C       C T C G       G G G C G     C
    T       | | | |                 T T
    G       G A G C
      G G A        A     CCGTC
                    C - G
                    T + G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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