The detailed information of tRNA gene sequence


Sequence ID>ENV09000268
Genome IDABSN01041716
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 180
End posion on genome 106
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cccgttattg
tRNA gene sequence 
GGCCCCGTCGTCTAGCCTGGTCCAGGACACCACCCTTTCACGGTGGTGACGCGGGTTCGA
ATCCCGCCGGGGTCAttg
Downstream region at tRNA end position 
atactcgaga
Secondary structure (Cloverleaf model)
>ENV09000268	Glu	TTC
                   g      Attg atactcgaga
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
    C C G A        C      | | | | |     G
  T         T C T G       G C G G G     C
  G         + | | |                 T T
  G         G G A C
    T C C A        A     TGAC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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