The detailed information of tRNA gene sequence


Sequence ID>ENV09000283
Genome IDABSN01044288
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 626
End posion on genome 540
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tcaaaggttc
tRNA gene sequence 
GGGGATGTGGCGGAACTGGCAGACGCGCAGGTCTCAGAAGCCTGTGATGGTGACATCGTG
GAGGTTCAAGTCCTCTCATCCCCACCA
Downstream region at tRNA end position 
tgattttcgg
Secondary structure (Cloverleaf model)
>ENV09000283	Leu	CAG
                   c      ACCA tgattttcgg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T C T C C     A
      C A A        G      + | | | |     A
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGATGGTGACATCGT
                    C - G
                    A - T
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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