The detailed information of tRNA gene sequence


Sequence ID>ENV09000289
Genome IDABSN01044880
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 611
End posion on genome 539
Amino Acid Pseudo
Anticodon CCC
Upstream region at tRNA start position 
ttgaggtgac
tRNA gene sequence 
ACGGCAGTGATCTAAAGGCTATGATTCGAGCTTCCCAAGCTTGATATCTGGGTTCAATTC
CCAGCTGCCGTACtt
Downstream region at tRNA end position 
tttttcttat
Secondary structure (Cloverleaf model)
>ENV09000289	Pseudo	CCC
                   c      ACtt tttttcttat
                     A - T
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T T
                    T     G A C C C     A
      A A A        G      | | | | |     A
    G       T C T A       C T G G G     C
    G         | | |                 T T
    C       T G A T
      T A          T     ATAT
                    C - G
                    G + T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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