The detailed information of tRNA gene sequence


Sequence ID>ENV09000290
Genome IDABSN01045017
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 229
End posion on genome 153
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agcatccgcc
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAAGTTCAAA
TCTTGCCCCCGCAACCA
Downstream region at tRNA end position 
cctcttctct
Secondary structure (Cloverleaf model)
>ENV09000290	Met	CAT
                   c      ACCA cctcttctct
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T T C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A A G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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