The detailed information of tRNA gene sequence


Sequence ID>ENV09000305
Genome IDABSN01047669
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 502
End posion on genome 577
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
accacacagc
tRNA gene sequence 
GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAAT
CCCACACGACCCACCA
Downstream region at tRNA end position 
tttttggcgg
Secondary structure (Cloverleaf model)
>ENV09000305	Lys	TTT
                   c      ACCA tttttggcgg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     C A C C C     A
      T G A        A      | |   | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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