The detailed information of tRNA gene sequence


Sequence ID>ENV09000307
Genome IDABSN01048772
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 507
End posion on genome 582
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tttatattat
tRNA gene sequence 
GGGGTTATGGGGTAACTTGGTTTAGCCTTCGAGGTTTGGGACCTTGCGATCCCGGTTCAA
ATCCGGGTAGCCCCACgt
Downstream region at tRNA end position 
tctattataa
Secondary structure (Cloverleaf model)
>ENV09000307	Pro	TGG
                   t      ACgt tctattataa
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A
                     A - T          T A
                    T     G G G C C     A
    T C A A        G      | | | | |     A
  T         T G G G       C C C G G     C
  G         + | | +                 T T
  G         G C C T
    T T T A        T     CGAT
                    C - G
                    G + T
                    A - T
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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