The detailed information of tRNA gene sequence


Sequence ID>ENV09000319
Genome IDABSN01049922
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 458
End posion on genome 382
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cctttcttgt
tRNA gene sequence 
GGCGCATTCGTCTAGCGGCCCAGGACGCCGCCCTCTCAAGGCGGAGATCGCGGGTTCGAA
TCCCGCATGCGCCACCA
Downstream region at tRNA end position 
tatcgcgaat
Secondary structure (Cloverleaf model)
>ENV09000319	Glu	CTC
                   t      ACCA tatcgcgaat
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     C G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       G C G G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        G     AGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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