The detailed information of tRNA gene sequence


Sequence ID>ENV09000340
Genome IDABSN01055529
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 275
End posion on genome 360
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
cagatcgtgg
tRNA gene sequence 
GCCCGGATGGCGAAACTGGTAGACGTAGCGGACTTAAAATCCGTTGAGGAGCGATCCTCG
TGCAGGTTCGAGTCCTGCTCCGGGCAtgt
Downstream region at tRNA end position 
ggcagttgcg
Secondary structure (Cloverleaf model)
>ENV09000340	Leu	TAA
                   g      Atgt ggcagttgcg
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T G
                    T     C G T C C     A
      C A A        G      | | | | |     G
    T       A G C G       G C A G G     C
    G         | | +                 T T
    G       A C G T
      T A G        A     TGAGGAGCGATCCTCGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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