The detailed information of tRNA gene sequence


Sequence ID>ENV09000353
Genome IDABSN01057369
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 398
End posion on genome 312
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
agatggataa
tRNA gene sequence 
GCCCGGATGGCGGAACTGGCAGACGCGCCGGACTCAAAATCCGGTTCTCGTAAGAGAGTG
GGAGTTCGACCCTCCCTCTGGGCACCA
Downstream region at tRNA end position 
acggttcacc
Secondary structure (Cloverleaf model)
>ENV09000353	Leu	CAA
                   a      ACCA acggttcacc
                     G - C
                     C - G
                     C - G
                     C - G
                     G + T
                     G - C
                     A - T          C C
                    T     C C C T C     A
      C A A        G      | | | | |     G
    T       G G C G       G G G A G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TTCTCGTAAGAGAGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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