The detailed information of tRNA gene sequence


Sequence ID>ENV09000355
Genome IDABSN01057399
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 380
End posion on genome 305
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tggttttttt
tRNA gene sequence 
GGCGGCATAGCCAAGTGGCTAAGGCAGCGGTCTGCAAAACCGTTATTCATCGGTTCGAAT
CCGATTGCCGCCTCCA
Downstream region at tRNA end position 
gcagatcaca
Secondary structure (Cloverleaf model)
>ENV09000355	Cys	GCA
                   t      TCCA gcagatcaca
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     T A G C C     A
      T G A        A      | | | | |     G
    G       A C C G       A T C G G     C
    G         | | |                 T T
    C       A G G C
      T A          A     TATTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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