The detailed information of tRNA gene sequence


Sequence ID>ENV09000371
Genome IDABSN01058912
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 297
End posion on genome 370
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccctctctgt
tRNA gene sequence 
GCGGTAGTAGTTTAATGGCAAAACACTAGTCTTCAACACTGGCTTCGTGGGTTCGATTCC
CATCTACCGCTCCA
Downstream region at tRNA end position 
ttatttattt
Secondary structure (Cloverleaf model)
>ENV09000371	SeC	TCA
                   t      TCCA ttatttattt
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C          T T
                    T     T A C C C     A
        A A        A      + | | | |     G
      T     T T T G       G T G G G     C
      G     | | | |                 T T
      G     A A A C
        C A        A     CTTC
                    C - G
                    T + G
                    A - T
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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