The detailed information of tRNA gene sequence


Sequence ID>ENV09000374
Genome IDABSN01059052
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 277
End posion on genome 205
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
acaaccaccc
tRNA gene sequence 
GGGGACGTAGCTCAATTGGGAGAGCACCGCCTTTGCAAGGCGGGGGTTAGGGGTTCGAGC
CCCCTCGTCTCCAgtt
Downstream region at tRNA end position 
ttccttgcgg
Secondary structure (Cloverleaf model)
>ENV09000374	Ala	TGC
                   c      Agtt ttccttgcgg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          C G
                    T     T C C C C     A
      T A A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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