The detailed information of tRNA gene sequence


Sequence ID>ENV09000380
Genome IDABSN01060875
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 232
End posion on genome 319
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gcacgaacag
tRNA gene sequence 
GCCGAAGTGGCGGAACTGGCAGACGCAGGGGACTCAAAATCCCCCGGGCCTTGCGCCCTT
GAGGGTTCAAATCCCTCCTTCGGCACCA
Downstream region at tRNA end position 
tgttttcaag
Secondary structure (Cloverleaf model)
>ENV09000380	Leu	CAA
                   g      ACCA tgttttcaag
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      C A A        G      | | | | |     A
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGGGCCTTGCGCCCTT
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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