The detailed information of tRNA gene sequence


Sequence ID>ENV09000388
Genome IDABSN01062824
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 501
End posion on genome 574
Amino Acid Pseudo
Anticodon TTC
Upstream region at tRNA start position 
taccttgtac
tRNA gene sequence 
GGCGCGTTCGACTTCTGGTGAGGTCGCCAGTCTTTCACACTGGCCAGGTTGGGTTCGAAT
CCCACACGCGTCACtc
Downstream region at tRNA end position 
tcgttgcggg
Secondary structure (Cloverleaf model)
>ENV09000388	Pseudo	TTC
                   c      ACtc tcgttgcggg
                     G - C
                     G + T
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     C A C C C     A
      T C T        C        | | | |     G
    G       T C A G       T T G G G     C
    G       + | | |                 T T
    T       G G T C
      G A          G     CCAGG
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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