The detailed information of tRNA gene sequence


Sequence ID>ENV09000390
Genome IDABSN01063059
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 634
End posion on genome 558
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcgcagtttc
tRNA gene sequence 
CGGGGTGTAGCGCAGTCCGGTAGCGCGCTTGCTTTGGGAGCAAGATGTCGTAGGTTCGAA
TCCTATCACCCCGACCA
Downstream region at tRNA end position 
aagtgtcaaa
Secondary structure (Cloverleaf model)
>ENV09000390	Pro	TGG
                   c      ACCA aagtgtcaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T A T C C     A
      T G A        A      + | | | |     G
    C       C G C G       G T A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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