The detailed information of tRNA gene sequence


Sequence ID>ENV09000408
Genome IDABSN01065583
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 361
End posion on genome 434
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gacgagtttc
tRNA gene sequence 
GGCTGGGTAGCTCAGGTGGTTAGAGCACGGCACTCATAATGCCGGGGTCGGCGGTTCGAA
TCCGCCCCCAGCTAtgc
Downstream region at tRNA end position 
tcgcggaacg
Secondary structure (Cloverleaf model)
>ENV09000408	Met	CAT
                   c      Atgc tcgcggaacg
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C C G C C     A
      G G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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