The detailed information of tRNA gene sequence


Sequence ID>ENV09000415
Genome IDABSN01065857
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 514
End posion on genome 443
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tagctttcct
tRNA gene sequence 
ACGGGCATGGTGCAACGGTAGCATACGGGTCTCCAAAACCTTTGATCTGGGTTCGAATCC
TAGTGCCCGTGCag
Downstream region at tRNA end position 
attaatttgc
Secondary structure (Cloverleaf model)
>ENV09000415	Trp	CCA
                   t      GCag attaatttgc
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G A T C C     A
        A A        G      | | + | |     G
      C     C G T G       C T G G G     C
      G     | | | +                 T T
      G     G C A T
        T A        A     TGAT
                    C   T
                    G + T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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