The detailed information of tRNA gene sequence


Sequence ID>ENV09000446
Genome IDABSN01070009
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 386
End posion on genome 311
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ctggtcctta
tRNA gene sequence 
GTCCCCGTAGCTCAAATGGATAGAGCACGCGTTTCCTAAACGTGTGATCCCGGTTCAATT
CCGGGCGGGGGCACCA
Downstream region at tRNA end position 
tccgtcgctc
Secondary structure (Cloverleaf model)
>ENV09000446	Arg	CCT
                   a      ACCA tccgtcgctc
                     G - C
                     T + G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     G G G C C     A
      A A A        A      | | | | |     A
    T       C T C G       C C C G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     TGAT
                    C - G
                    G + T
                    C - G
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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