The detailed information of tRNA gene sequence


Sequence ID>ENV09000494
Genome IDABSO01005973
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormate_C1
Species
Start position on genome 207
End posion on genome 118
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcagggctac
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCCGAAGGAGCGCGACTGGAAATCGCGTAAGTGCCGAAAGGTG
CTTCGCGGGTTCAAATCCCGCTCTCTCCGCtt
Downstream region at tRNA end position 
gaaaggggcc
Secondary structure (Cloverleaf model)
>ENV09000494	Ser	GGA
                   c      GCtt gaaaggggcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     A
    G       G C C T       G C G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TAAGTGCCGAAAGGTGCTTC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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