The detailed information of tRNA gene sequence


Sequence ID>ENV09000542
Genome IDABSO01016390
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormate_C1
Species
Start position on genome 287
End posion on genome 201
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gcctccactc
tRNA gene sequence 
GCGCGAGTGGCGGAATTGGCAGACGCGCAGGATTCAGGTTCCTGTGTCCGAAAGGACGTG
GGGGTTCAAGTCCCCCCTCGCGCACCA
Downstream region at tRNA end position 
ctgcgatgtc
Secondary structure (Cloverleaf model)
>ENV09000542	Leu	CAG
                   c      ACCA ctgcgatgtc
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGTCCGAAAGGACGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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