The detailed information of tRNA gene sequence


Sequence ID>ENV09000557
Genome IDABSO01019779
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormate_C1
Species
Start position on genome 477
End posion on genome 553
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cttcgcgcaa
tRNA gene sequence 
CGGGGTGTAGCTTAGCCTGGTAGAGCGCCTGGTTTGGGACCAGGAGGTCGCAGGTTCGAA
TCCTGTCGCCCCGACCA
Downstream region at tRNA end position 
ttttccggac
Secondary structure (Cloverleaf model)
>ENV09000557	Pro	TGG
                   a      ACCA ttttccggac
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     G
    C       T T C G       G C A G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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