The detailed information of tRNA gene sequence


Sequence ID>ENV09000561
Genome IDABSO01021126
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormate_C1
Species
Start position on genome 260
End posion on genome 185
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tgggcgccgc
tRNA gene sequence 
GGGGTCGTAGCTCAGTTGGTAGAGCGCCTGGTTCGCAATCAGGAGGTCTGGGGTTCGACT
CCCCACGGCTCCACCA
Downstream region at tRNA end position 
tcccgctcga
Secondary structure (Cloverleaf model)
>ENV09000561	Ala	CGC
                   c      ACCA tcccgctcga
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     C - G
                     G - C          T C
                    T     A C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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