The detailed information of tRNA gene sequence


Sequence ID>ENV09000562
Genome IDABSO01021377
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormate_C1
Species
Start position on genome 373
End posion on genome 297
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gttccccttg
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGCTAGAGCGCCTCGGTCGCATCGAGGAGGTCGTGGGTTCGAC
TCCCATCACCTCCACCA
Downstream region at tRNA end position 
agggagcatc
Secondary structure (Cloverleaf model)
>ENV09000562	Ala	CGC
                   g      ACCA agggagcatc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          T C
                    T     T A C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  G       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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