The detailed information of tRNA gene sequence


Sequence ID>ENV09000583
Genome IDABSP01000668
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 917
End posion on genome 831
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
acatacatcc
tRNA gene sequence 
GNCCGGGTGGTGACCTTGGTAGACACAAGAGACTTAAAATCTCTCGCTCGTAAGCGTGTG
CCGGTTCGACTCCGGCTCCGGGCACCA
Downstream region at tRNA end position 
agttatactt
Secondary structure (Cloverleaf model)
>ENV09000583	Leu	TAA
                   c      ACCA agttatactt
                     G - C
                     N   G
                     C - G
                     C - G
                     G - C
                     G - C
                     G + T          T C
                    T     C G G C C     A
      T C C        G      | | | | |     G
    T       A G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGCTCGTAAGCGTGT
                    A - T
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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