The detailed information of tRNA gene sequence


Sequence ID>ENV09000598
Genome IDABSP01001594
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 386
End posion on genome 460
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cccgtcctgt
tRNA gene sequence 
AGGCGATTAGCTCAGGGGTAGAGCGCTTCCTTCACACGGAAGAGGCCACTGGTTCGATAC
CAGTATCGCCTACCA
Downstream region at tRNA end position 
tcttctccac
Secondary structure (Cloverleaf model)
>ENV09000598	Val	CAC
                   t      ACCA tcttctccac
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          A T
                    T     T G A C C     A
        G A        A      | | | | |     G
      G     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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