The detailed information of tRNA gene sequence


Sequence ID>ENV09000604
Genome IDABSP01001932
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 546
End posion on genome 619
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
actttatact
tRNA gene sequence 
GGTTGCGTAGCAAAGTGGTTATGCAGTGGCCTGCAAAGCCATCTAGAGCGGTTCGATTCC
GCCCGCAGCCTCCA
Downstream region at tRNA end position 
tagtggattc
Secondary structure (Cloverleaf model)
>ENV09000604	Cys	GCA
                   t      TCCA tagtggattc
                     G - C
                     G - C
                     T + G
                     T - A
                     G - C
                     C - G
                     G - C          T T
                    T     C C G C C     A
        G A        A        | | | |     G
      T     A A C G       A G C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     CTAG
                    G + T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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