The detailed information of tRNA gene sequence


Sequence ID>ENV09000615
Genome IDABSP01002672
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 80
End posion on genome 165
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
atagtttaat
tRNA gene sequence 
GCGGAAGTGGCGGAATGGCAGACGCGCTAGCTTCAGGAGCTAGTGGGGTAACACCCATGG
AGGTTCAAGTCCTCTCTTCCGCACCA
Downstream region at tRNA end position 
tgaatcaaga
Secondary structure (Cloverleaf model)
>ENV09000615	Leu	CAG
                   t      ACCA tgaatcaaga
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     A
    G       G G C G       G G A G G     C
    G         | | |                 T T
    C       A C G C
      A G          G     TGGGGTAACACCCAT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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