The detailed information of tRNA gene sequence


Sequence ID>ENV09000616
Genome IDABSP01002757
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 204
End posion on genome 279
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgacccttt
tRNA gene sequence 
GGCGGTGTAGCACAGTGGTAGTTGCAGGGGTCTCATAAGCCCCGTGTCGGCGGTTCGAAT
CCGCCCACCGNCACCA
Downstream region at tRNA end position 
gacttctccc
Secondary structure (Cloverleaf model)
>ENV09000616	Met	CAT
                   t      ACCA gacttctccc
                     G - C
                     G   N
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C C G C C     A
      T G A        A      | | | | |     G
    G       C A C G       G G C G G     C
    G         | | |                 T T
    T       T T G C
      A G          A     GTGTC
                    G - C
                    G - C
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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