The detailed information of tRNA gene sequence


Sequence ID>ENV09000628
Genome IDABSP01004474
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 403
End posion on genome 326
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gttccgtttt
tRNA gene sequence 
CGGGATGTAGCTCAGCCCGGTTAGAGCACCTGCCTTGGGCGCAGGGGGCCGGAGGTTCAA
ATCCTCTCATCCCGACAA
Downstream region at tRNA end position 
tgaacctgat
Secondary structure (Cloverleaf model)
>ENV09000628	Pro	TGG
                   t      ACAA tgaacctgat
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     A
  C         C T C G       G G A G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     GGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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