The detailed information of tRNA gene sequence


Sequence ID>ENV09000631
Genome IDABSP01004731
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 628
End posion on genome 553
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgccaatttc
tRNA gene sequence 
GGGGTCGTAGCTCAGTTGGTAGAGCATCTGCTTTGCAAGCAGAGGGTCGCGAGTTCGAAT
CTCGCCGGCTCCACCA
Downstream region at tRNA end position 
aattgagcgc
Secondary structure (Cloverleaf model)
>ENV09000631	Ala	TGC
                   c      ACCA aattgagcgc
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     C - G
                     G - C          T A
                    T     C G C T C     A
      T G A        A      | | | | |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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