The detailed information of tRNA gene sequence


Sequence ID>ENV09000640
Genome IDABSP01006815
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 485
End posion on genome 410
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
taaacatatg
tRNA gene sequence 
GTGGGTGTAGCTCAGTCGGTAGAGCACCGGGTTGTGGCCCCGGTTGTCGCGGGTTCAATC
CCCGTCACTCACCCCA
Downstream region at tRNA end position 
ttttgcctgc
Secondary structure (Cloverleaf model)
>ENV09000640	His	GTG
                   g      CCCA ttttgcctgc
                     G - C
                     T - A
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          C T
                    T     T G C C C     A
      T G A        A      + | | | |     A
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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