The detailed information of tRNA gene sequence


Sequence ID>ENV09000655
Genome IDABSP01009912
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 437
End posion on genome 361
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaatcaat
tRNA gene sequence 
CGCGGGGTGGAGCAGCTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
tataaaactg
Secondary structure (Cloverleaf model)
>ENV09000655	Met	CAT
                   t      ACCA tataaaactg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | + | | |     A
    T       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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