The detailed information of tRNA gene sequence


Sequence ID>ENV09000667
Genome IDABSP01011894
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 156
End posion on genome 231
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaattatcac
tRNA gene sequence 
AGGGGTGTAGCTCAACTGGTAGAGTAGCGGTCTCCAAAACCGTTGGTTGGGGGTTCGAGT
CCCTCCGCCCCTGCCA
Downstream region at tRNA end position 
ctttcgccca
Secondary structure (Cloverleaf model)
>ENV09000667	Trp	CCA
                   c      GCCA ctttcgccca
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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