The detailed information of tRNA gene sequence


Sequence ID>ENV09000673
Genome IDABSP01013631
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 306
End posion on genome 230
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccccctcgt
tRNA gene sequence 
GGTGAGGTAGCTCAGACGGTTAGAGCGAGGGATTCATAACCCCTAGGTCGGCGGTTCGAT
TCCGCCCCTCACCACCA
Downstream region at tRNA end position 
catcctcctt
Secondary structure (Cloverleaf model)
>ENV09000673	Met	CAT
                   t      ACCA catcctcctt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T T
                    T     C C G C C     A
      A G A        A      | | | | |     G
    C       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    G - C
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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