The detailed information of tRNA gene sequence


Sequence ID>ENV09000679
Genome IDABSP01014160
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 259
End posion on genome 334
Amino Acid Pseudo
Anticodon GTT
Upstream region at tRNA start position 
ccaatttagt
tRNA gene sequence 
TCCGGTCATCATTCCATGGTGAATGCCCCGACTGTTAATCGGGTGACGCTAGGTTCGAGC
CCTAGGGCCGGAGCCA
Downstream region at tRNA end position 
atttatgcac
Secondary structure (Cloverleaf model)
>ENV09000679	Pseudo	GTT
                   t      GCCA atttatgcac
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     C - G          C G
                    A     G A T C C     A
      A C C        T      | | | | |     G
    T       T T A C       C T A G G     C
    G       | | | |                 T T
    G       A A T G
      T G          C     TGACG
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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