The detailed information of tRNA gene sequence


Sequence ID>ENV09000680
Genome IDABSP01014160
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 341
End posion on genome 422
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gccaatttat
tRNA gene sequence 
GCACTAGACACCCAAATGGTCGGGTAGCGGACTGTAAACCCGTGGCTTCGGCAAGTAGGT
TCGATTCCTACCTAGTGCACCA
Downstream region at tRNA end position 
tttctggaag
Secondary structure (Cloverleaf model)
>ENV09000680	Tyr	GTA
                   t      ACCA tttctggaag
                     G - C
                     C - G
                     A - T
                     C - G
                     T - A
                     A - T
                     G - C          T T
                    A     C A T C C     A
      A A A        C      | | | | |     G
    T       C C C A       G T A G G     C
    G       | | | |                 T T
    G       G G G T
      T C          A     GGCTTCGGCAA
                    G + T
                    C - G
                    G - C
                    G - C
                    A   C
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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