The detailed information of tRNA gene sequence


Sequence ID>ENV09000681
Genome IDABSP01014160
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 428
End posion on genome 515
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caccatttct
tRNA gene sequence 
GGAAGCTTGGGAGAGAGGATTAATCCACCTGTTTGCTAAACAGACGATCCGCAAGGGTCC
GCAGGTTCAAATCCTGCAGCTTCCACCA
Downstream region at tRNA end position 
tcttgtagaa
Secondary structure (Cloverleaf model)
>ENV09000681	Ser	GCT
                   t      ACCA tcttgtagaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     T - A          T A
                    T     C G T C C     A
      A G A        G      | | | | |     A
    G       G A G G       G C A G G     C
    G         | | |                 T T
    A       A T C C
      T T A        A     CGATCCGCAAGGGTCC
                    C   A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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